Nanopore sequencing preprints

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Theme editors: Devika Ganesamoorthy , Lachlan Coin


Preprint Authors Date Reviews & Comments Intersect Actions
Performance of neural network basecalling tools for Oxford Nanopore sequencing 8th Feb 2019
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Long-range single-molecule mapping of chromatin accessibility in eukaryotes Dec 2018
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Simultaneous profiling of chromatin accessibility and methylation on human cell lines with nanopore sequencing Dec 2018
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Decoding the Epitranscriptional Landscape from Native RNA Sequences Dec 2018
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Searching and mapping genomic subsequences in nanopore raw signals through novel dynamic time warping algorithms Dec 2018
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Nanopore direct RNA sequencing reveals modification in full-length coronavirus genomes Dec 2018
recombination rnaseq Bookmark
Repeat expansion and methylation state analysis with nanopore sequencing Nov 2018
tandem_repeats Bookmark
Long read-based de novo assembly of low complex metagenome samples results in finished genomes and reveals insights into strain diversity and an active phage system Nov 2018
crispr genome_assembly metagenomics Bookmark
Using long-read sequencing to detect imprinted DNA methylation Oct 2018
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DeepSignal: detecting DNA methylation state from Nanopore sequencing reads using deep-learning P. Ni...
J. Wang
Aug 2018
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The complex architecture of plant transgene insertions F. Jupe...
J. R. Ecker
Mar 2018
crispr Bookmark
NanoMod: a computational tool to detect DNA modifications using Nanopore long-read sequencing data Q. Liu...
K. Wang
Mar 2018
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An accurate and rapid continuous wavelet dynamic time warping algorithm for unbalanced global mapping in nanopore sequencing R. Han...
X. Gao
Dec 2017
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Comparison of Oxford Nanopore basecalling tools R. Wick, L. Judd, K. Holt Dec 2017
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Nanopore sequencing and assembly of a human genome with ultra-long reads M. Jain...
M. Loose
Apr 2017
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genome_assembly Bookmark
Nanopore detection of bacterial DNA base modifications A. B. Mcintyre...
C. E. Mason
Apr 2017
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De novo Identification of DNA Modifications Enabled by Genome-Guided Nanopore Signal Processing M. H. Stoiber...
J. B. Brown
Dec 2016
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Detecting DNA Methylation using the Oxford Nanopore Technologies MinION sequencer J. T. Simpson...
W. Timp
Apr 2016
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