Nanopore sequencing preprints

See other preprint channels in Genomics.

Register as an editor for this theme. See keywords used to identify matching preprints

If you believe a preprint is missing from this list it is possible that we have not yet indexed it. Please use search function to help us index it.


Theme editors: Lachlan Coin , Devika Ganesamoorthy


Preprint Authors Date Reviews & Comments Intersect Actions
Comparison of long-read sequencing technologies in the hybrid assembly of complex bacterial genomes 28th Jan 2019
genome_assembly Bookmark
Accessory genome contributes to the virulence and resistance of the ocular isolate of Pseudomonas aeruginosa: A complete genome analysis Dec 2018
Bookmark
MinION Nanopore Sequencing of Multiple Displacement Amplified Mycobacteria DNA Direct from Sputum Dec 2018
tuberculosis Bookmark
Evaluating the Genome and Resistome of Extensively Drug-Resistant Klebsiella pneumoniae using Native DNA and RNA Nanopore Sequencing Dec 2018
rnaseq Bookmark
NanoARG: A web service for identification of antimicrobial resistance elements from nanopore-derived environmental metagenomes Nov 2018
metagenomics Bookmark
Convergence of virulence and multidrug resistance in a single plasmid vector in multidrug-resistant Klebsiella pneumoniae ST15 Nov 2018
Bookmark
Nanopore sequencing enables high-resolution analysis of resistance determinants and mobile elements in the human gut microbiome Nov 2018
metagenomics Bookmark
Lineage calling can identify antibiotic resistant clones within minutes Aug 2018
metagenomics Bookmark
Genomic Surveillance for Antimicrobial Resistance in Mannheimia haemolytica Using Nanopore Single Molecule Sequencing Technology Aug 2018
genome_assembly Bookmark
Nanopore-based DNA sequencing in clinical microbiology: preliminary assessment of basic requirements H. Harstad, R. Ahmad, A. Bredberg Aug 2018
metagenomics tuberculosis Bookmark
Evolution of carbapenem resistance in Acinetobacter baumannii during a prolonged infection J. Hawkey...
K. E. Holt
Dec 2017
Bookmark
Real-time analysis of nanopore-based metagenomic sequencing from orthopaedic device infection N. D. Sanderson...
D. W. Eyre
Nov 2017
streaming Bookmark
Antimicrobial resistant Klebsiella pneumoniae carriage and infection in specialized geriatric care wards linked to acquisition in the referring hospital C. L. Gorrie...
K. E. Holt
Nov 2017
metagenomics Bookmark
Completing bacterial genome assemblies with multiplex MinION sequencing R. R. Wick...
K. E. Holt
Jul 2017
Comments
genome_assembly Bookmark
Rapid resistome mapping using nanopore sequencing E. v. d. Helm...
M. O. A. O. A. Sommer
Aug 2016
metagenomics Bookmark
Comparison of bacterial genome assembly software for MinION data K. Judge...
S. J. Peacock
May 2016
Comments
genome_assembly Bookmark