See other preprint channels in Genomics.
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|Preprint||Authors||Date||Reviews & Comments||Intersect||Actions|
|First hybrid complete genome of Aeromonas veronii reveals chromosome-mediated novel structural variant mcr-3.19 from human clinical specimen||14th Mar 2019||Bookmark|
|Nanopore sequencing for fast determination of plasmids, phages, virulence markers, and antimicrobial resistance genes in Shiga toxin-producing Escherichia coli||8th Mar 2019||Bookmark|
|Genomic investigation reveals contaminated detergent as the source of an ESBL-producing Klebsiella michiganensis outbreak in a neonatal unit||6th Mar 2019||Bookmark|
|Rapid, multiplexed, whole genome and plasmid sequencing of foodborne pathogens using long-read nanopore technology||23rd Feb 2019||genome_assembly||Bookmark|
|Comparison of long-read sequencing technologies in the hybrid assembly of complex bacterial genomes||28th Jan 2019||genome_assembly||Bookmark|
|Accessory genome contributes to the virulence and resistance of the ocular isolate of Pseudomonas aeruginosa: A complete genome analysis||Dec 2018||Bookmark|
|MinION Nanopore Sequencing of Multiple Displacement Amplified Mycobacteria DNA Direct from Sputum||Dec 2018||tuberculosis||Bookmark|
|Evaluating the Genome and Resistome of Extensively Drug-Resistant Klebsiella pneumoniae using Native DNA and RNA Nanopore Sequencing||Dec 2018||rnaseq||Bookmark|
|NanoARG: A web service for identification of antimicrobial resistance elements from nanopore-derived environmental metagenomes||Nov 2018||metagenomics||Bookmark|
|Convergence of virulence and multidrug resistance in a single plasmid vector in multidrug-resistant Klebsiella pneumoniae ST15||Nov 2018||Bookmark|
|Nanopore sequencing enables high-resolution analysis of resistance determinants and mobile elements in the human gut microbiome||Nov 2018||metagenomics||Bookmark|
|Lineage calling can identify antibiotic resistant clones within minutes||Aug 2018||metagenomics||Bookmark|
|Genomic Surveillance for Antimicrobial Resistance in Mannheimia haemolytica Using Nanopore Single Molecule Sequencing Technology||Aug 2018||genome_assembly||Bookmark|
|Nanopore-based DNA sequencing in clinical microbiology: preliminary assessment of basic requirements||H. Harstad, R. Ahmad, A. Bredberg||Aug 2018||metagenomics tuberculosis||Bookmark|
|Evolution of carbapenem resistance in Acinetobacter baumannii during a prolonged infection||J. Hawkey...
K. E. Holt
|Real-time analysis of nanopore-based metagenomic sequencing from orthopaedic device infection||N. D. Sanderson...
D. W. Eyre
|Antimicrobial resistant Klebsiella pneumoniae carriage and infection in specialized geriatric care wards linked to acquisition in the referring hospital||C. L. Gorrie...
K. E. Holt
|Completing bacterial genome assemblies with multiplex MinION sequencing||R. R. Wick...
K. E. Holt
|Rapid resistome mapping using nanopore sequencing||E. v. d. Helm...
M. O. A. O. A. Sommer
|Comparison of bacterial genome assembly software for MinION data||K. Judge...
S. J. Peacock