Metabolic engineering preprints

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Preprint Authors Date Reviews & Comments Intersect Actions
Medusa: software to build and analyze ensembles of genome-scale metabolic network reconstructions 13th Feb 2019
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Genome-Scale reconstruction of Paenarthrobacter aurescens TC1 metabolic model towards the study of atrazine bioremediation 1st Feb 2019
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Dynamic control of pathway expression with riboregulated switchable feedback promoters 24th Jan 2019
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egKnock: identifying direct gene knockout strategies for microbial strain optimization based on metabolic network with gene-protein-reaction relationships 10th Jan 2019
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Metabolic Network Reductions Dec 2018
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Metabolic Control Analysis of Exponential Growth and Product Formation Dec 2018
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MOMO - Multi-Objective Metabolic mixed integer Optimization: application to yeast strain engineering Nov 2018
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MCS^2: Minimal coordinated supports for fast enumeration of minimal cut sets in metabolic networks Nov 2018
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Drop-In Biofuel production by using fatty acid photodecarboxylase from Chlorella variabilis in the oleaginous yeast Yarrowia lipolytica. Nov 2018
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Guiding the refinement of biochemical knowledgebases with ensembles of metabolic networks and semi-supervised learning Nov 2018
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Revealing metabolic flexibility of Candidatus Accumulibacter phosphatis through redox cofactor analysis and metabolic network modeling Nov 2018
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CopySwitch - in vivo optimization of gene copy numbers for heterologous gene expression in Bacillus subtilis Oct 2018
antibiotic_resistance recombination Bookmark
Kinetic models of metabolism that consider alternative steady-state solutions of intracellular fluxes and concentrations Oct 2018
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Gsmodutils: A python based framework for test-driven genome scale metabolic model development Sep 2018
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Model Classification for Uncertainty Reduction in Biochemical Kinetic Models Sep 2018
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Visualizing metabolic network dynamics through time-series metabolomics data Sep 2018
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Synthetic genome defenses against selfish DNA elements stabilize engineered bacteria against evolutionary failure Sep 2018
crispr methylation Bookmark
Reconciling high-throughput gene essentiality data with metabolic network reconstructions Sep 2018
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Pan-genome-scale network reconstruction: a framework to increase the quantity and quality of metabolic network reconstructions throughout the tree of life Sep 2018
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Production of santalenes and bergamotene in Nicotiana tabacum plants Aug 2018
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