Linked Reads preprints

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Preprint Authors Date Reviews & Comments Intersect Actions
Genome-wide recombination map construction from single individuals using linked-read sequencing 10th Dec 2018
recombination Bookmark
Mutation detection in thousands of acute myeloid leukemia cells using single cell RNA-sequencing 18th Oct 2018
rnaseq singlecell_rna_sequencing Bookmark
A haplotype-resolved draft genome of the European sardine (Sardina pilchardus) B. Louro...
A. V. M. Canario
14th Oct 2018
Bookmark
Single-cell transcriptome analysis of CD34+ stem cell-derived myeloid cells identifies a CFU-GEMM-like population permissive to human cytomegalovirus infection. 9th Oct 2018
singlecell_rna_sequencing Bookmark
Evaluating the quality of the 1000 genomes project data 3rd Aug 2018
Bookmark
Assembly of mbsize genome segments from linked read sequencing of crispr dna targets 1st Aug 2018
crispr Bookmark
New de novo assembly of the Atlantic bottlenose dolphin (Tursiops truncatus) improves genome completeness and provides haplotype phasing. K. A. Martinez-Viaud...
A. Zimin
1st Aug 2018
genome_assembly Bookmark
Comparative analysis of droplet-based ultra-high-throughput single-cell RNA-seq systems X. Zhang...
J. Wang
2nd May 2018
rnaseq singlecell_rna_sequencing Bookmark
ARKS: chromosome-scale scaffolding of human genomedrafts with linked read kmers L. Coombe...
R. L. Warren
25th Apr 2018
genome_assembly Bookmark
Tigmint: Correcting Assembly Errors Using Linked Reads From Large Molecules S. D. Jackman...
I. Birol
20th Apr 2018
genome_assembly Bookmark
Performance Analysis of MEC Approach for Haplotype Assembly. S. Majidian, M. H. Kahaei 16th Mar 2018
nanopore Bookmark
Reproducible integration of multiple sequencing datasets to form high-confidence SNP, indel, and reference calls for five human genome reference materials J. Zook...
G. I. A. B. Consortium
13th Mar 2018
Bookmark
Single-cell transcriptome of antler stem cells from antlerogenic periosteum H. Ba...
C. Li
11th Feb 2018
rnaseq singlecell_rna_sequencing stem_cells Bookmark
A comprehensive model of DNA fragmentation for the preservation of High Molecular Weight DNA T. Klingstrom...
O. V. Pettersson
27th Jan 2018
Bookmark
SAKE (Single-cell RNA-Seq Analysis and Klustering Evaluation) Identifies Markers of Resistance to Targeted BRAF Inhibitors in Melanoma Cell Populations Y. Ho...
M. G. Hammell
Dec 2017
melanoma rnaseq singlecell_rna_sequencing Bookmark
CLAN: the CrossLinked reads ANalysis tool C. Zhong, S. Zhang Dec 2017
rnaseq Bookmark
Latent variable model for aligning barcoded short-reads improves downstream analyses A. Shajii, I. Numanagic, B. Berger Nov 2017
Bookmark
Tn5Prime, a Tn5 based 5' Capture Method for Single Cell RNA-seq C. Cole...
C. Vollmers
Nov 2017
rnaseq singlecell_rna_sequencing Bookmark
Cluster Headache: Comparing Clustering Tools for 10X Single Cell Sequencing Data S. Freytag...
M. Bahlo
Oct 2017
rnaseq singlecell_rna_sequencing Bookmark
A critical comparison of technologies for a plant genome sequencing project P. Paajanen...
M. D. Clark
Oct 2017
bionano genome_assembly Bookmark