Antimicrobial resistance preprints

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Preprint Authors Date Reviews & Comments Intersect Actions
Antibiotic treatment drives the diversification of the human gut resistome 2nd Feb 2019
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The International Space Station selects for microorganisms adapted to the extreme environment, but does not induce genomic and physiological changes relevant for human health 30th Jan 2019
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Microbiome and Antimicrobial Resistance Gene Dynamics in International Travelers Dec 2018
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Real-time capture of horizontal gene transfers from gut microbiota by engineered CRISPR-Cas acquisition Dec 2018
crispr streaming Bookmark
Assignment of virus and antimicrobial resistance genes to microbial hosts in a complex microbial community by combined long-read assembly and proximity ligation Dec 2018
genome_assembly Bookmark
Linking the Resistome and Plasmidome to the Microbiome Dec 2018
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NanoARG: A web service for identification of antimicrobial resistance elements from nanopore-derived environmental metagenomes Nov 2018
nanopore Bookmark
Antibiotic resistance and metabolic profiles as functional biomarkers that accurately predict the geographic origin of city metagenomics samples Nov 2018
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Prolonged Antibiotic Treatment Generates a Fluoroquinolone Resistant Gut Microbiome and Collateral Multi-Drug Resistance Nov 2018
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High levels of antibiotic resistance gene expression among birds living in a wastewater treatment plant Nov 2018
rnaseq Bookmark
City-wide metagenomics uncover antibiotic resistance reservoirs in urban beach and sewage waters Nov 2018
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Nanopore sequencing enables high-resolution analysis of resistance determinants and mobile elements in the human gut microbiome Nov 2018
nanopore Bookmark
Quantifying point-mutations in shotgun metagenomic data Oct 2018
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RefSoil+: A reference for antimicrobial resistance genes on soil plasmids Oct 2018
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Promoter activity of ORF-less gene cassettes isolated from the oral metagenome Sep 2018
recombination Bookmark
The microbial basis of impaired wound healing: differential roles for pathogens, \"bystanders\", and strain-level diversification in clinical outcomes Sep 2018
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FLASH: A next-generation CRISPR diagnostic for multiplexed detection of antimicrobial resistance sequences Sep 2018
crispr Bookmark
Haemophilus, antibiotic therapy and the airway microbiome in chronic obstructive pulmonary disease Sep 2018
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Lineage calling can identify antibiotic resistant clones within minutes Aug 2018
nanopore Bookmark
Phylogenetic barriers to horizontal transfer of antimicrobial peptide resistance genes in the human gut microbiota Aug 2018
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